3D GENOMICS

Single-cell and Spatial Transcriptomics, done right.

3DG is a boutique CRO specializing in high-resolution genomics services, from sample preparation through data analysis. Based in San Diego, working with pharma, biotech, and academic partners worldwide.

Your Research, Our Expertise.

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EXPERTS IN

Spatial Transcriptomics

At 3D Genomics, our spatial transcriptomics services combine gene expression with tissue context, giving you a detailed map of biology in action. From preserving tissue architecture to delivering high-quality spatial data and analysis, we help you uncover how cells interact, organize, and function—right where it matters. Whether you’re exploring cancer microenvironments, neuroscience, or developmental biology, we’re here to bring your questions into focus.

EXPERTS IN

Single-Cell Transcriptomics

At 3D Genomics, we specialize in high-resolution single-cell transcriptomics, helping researchers unravel the complexity of gene expression one cell at a time. Our expert team offers end-to-end services—from sample prep and library construction to sequencing and bioinformatic analysis—empowering you with the data you need to drive meaningful discoveries. With precision, flexibility, and deep scientific insight, we’re here to support your breakthroughs at every step.

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For clients who require pre-vetted suppliers or simplified contracting, 3DG is available on Scientist.com and ScienceExchange.com.

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Ready to move your spatial and single cell research forward?

Whether you’re planning a new study or building on prior work, we can help you achieve your research goals.

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